Software

I am a strong believer of open-source software and reproducible science.

I develop software, work, and collaborate via Github .

(Have a look at the video presentation on Github and how it enhances collaboration presented at Ocean Sciences Meeting 2022.)

I enjoy coding in Julia and also often use Python for data analysis.

A few open-source software packages I’m currently involved in their development are:

• Oceananigans.jl
  https://github.com/CliMA/Oceananigans.jl
  
  Julia software for fast, friendly, flexible, data-driven, ocean-flavoured fluid dynamics on CPUs and GPUs.

• Breeze.jl
  https://github.com/NumericalEarth/Breeze.jl
  
  Fast and friendly Julia software for atmospheric fluid dynamics on CPUs and GPUs, from large-eddy simulations to the mesoscale; built on Oceananigans.jl.

• NumericalEarth.jl
  https://github.com/NumericalEarth/NumericalEarth.jl
  
  A framework for simulating the Earth system at all scales with prescribed or prognostic atmosphere, ocean, sea ice, and land components.

• OceanBioME.jl
  https://github.com/OceanBioME/OceanBioME.jl
  
  A fast and flexible modelling environment written in Julia for modelling the coupled interactions between ocean biogeochemistry, carbonate chemistry, and physics.

• ParameterEstimocean.jl
  https://github.com/CliMA/ParameterEstimocean.jl
  
  Julia software for calibration of ocean turbulence parameterisations using Ensemble Kalman Inversion.

• FourierFlows.jl
  https://github.com/FourierFlows/FourierFlows.jl
  
  Tools for building fast, hackable, pseudospectral partial differential equation solvers on periodic domains on CPUs and GPUs.

• GeophysicalFlows.jl
  https://github.com/FourierFlows/GeophysicalFlows.jl
  
  Geophysical fluid dynamics pseudospectral solvers with Julia and FourierFlows.jl on CPUs and GPUs.